Shinya Yamamoto, D.V.M., Ph.D.
Picture
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Positions
- Associate Professor
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Department of Molecular & Human Genetics (primary) and Department of Neuroscience (secondary)
草榴社区入口
Houston, Texas United States
- Associate Director
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Genetics & Genomics Graduate Program, Graduate School of Biomedical Sciences, 草榴社区入口
- Investigator
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Jan and Dan Duncan Neurological Research Institute (NRI)
Texas Children's Hospital
Houston, Texas United States
- Co-Director, Drosophila Core
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Model Organisms Screening Center (MOSC) for the Undiagnosed Diseases Network (UDN)
- SFARI Investigator
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Simons Foundation Autism Research Initiative (SFARI)
- Co-Chair of Steering and Executive Committees
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Undiagnosed Diseases Network
Addresses
- Jan and Dan Duncan Neurological Research Institute (Office)
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1250 Moursund St.
NRI-1025.12
Houston, TX 77030
United States
Phone: (832) 824-8119
yamamoto@bcm.edu
Education
- BS from University of Tokyo
- 03/2005 - Tokyo, Japan
- DVM from Ministry of Agriculture, Forestry and Fisheries of Japan
- 04/2005 - Tokyo, Japan
- PhD from 草榴社区入口
- 03/2012 - Houston, Texas United States
- Post-Doctoral Fellowship at 草榴社区入口
- 12/2013 - Houston, Texas United States
Professional Interests
- Integration of Drosophila Genetics and Human Genomics
- New Disease Gene Discovery
- Drosophila Technology and Resource Development
- Cell-Cell Communication in Development and Disease
- Facilitation of the Use of Model Organisms in Human Disease Diagnosis and Research
- Bioinformatic Tool Development
Professional Statement
Many projects in the Yamamoto lab are related to rare and undiagnosed diseases. In fact, >25 million individuals are affected by rare or ultra-rare diseases in the US alone, and many experience a long and winding 'diagnostic odyssey' to try to find out the cause of their disorders. While state-of-the-art sequencing technologies such as whole-exome sequencing (WES) and whole-genome sequencing (WGS) may provide an answer to a subset of these individuals, many are left with a handful of candidate genetic variants that require experimental studies to understand their functional consequences. As a member of the Undiagnosed Diseases Network (UDN) Model Organisms Screening Center (MOSC) and BCM Center for Precision Medicine Models (CPMM), we utilize Drosophila to test whether a genetic variant(s) identified in a patient is the cause of their disease, which is pursued in close collaboration with clinicians and human geneticists across the country and abroad. I am also involved in development of novel computational tools such as MARRVEL and ModelMatcher with bioinformaticians and programmers to facilitate rare disease diagnosis and research.Over the years, my interest has expanded to include more common neurological disorders such as autism spectrum disorders (ASD), Alzheimer's disease, psychiatric diseases, and drug addiction. More recently, we are also developing creative strategies to study infectious diseases such as Zika virus mediated microcephaly and COVID-19, given their socioeconomic importance. In summary, while members of my lab and I work on diverse research topics, all projects are built on a common foundation that harness the 'awesome power of fly genetics'.
Websites
Selected Publications
- Yamamoto S*, Jaiswal M*, Charng WL, Gambin T, Karaca E, Mirzaa G, Wiszniewski W, Sandoval H, Haelterman NA, Xiong B, Zhang K, Bayat V, David G, Li T, Chen K, Gala U, Harel T, Pehlivan D, Penney S, Vissers LE, de Ligt J et al. (* Equal Contribution) "." Cell. 2014 Sep 25;159(1):200-214. Pubmed PMID:
- Yamamoto S, Charng WL, Rana NA, Kakuda S, Jaiswal M, Bayat V, Xiong B, Zhang K, Sandoval H, David G, Wang H, Haltiwanger RS, Bellen HJ "." Science. 2012 Nov 30;338(6111):1229-32. Pubmed PMID:
- Bellen HJ, Yamamoto S "." Cell. 2015 Sep 24;163(1):12-14. Pubmed PMID:
- Marcogliese PC*, Deal SL*, Andrews J*, Harnish JM*, Bhavana VH, Graves HK, Jangam S, ..., Rosenfeld JA, Marom R, Wangler MF#, Yamamoto S# (*Equal Contribution, #Co-Corresponding Authors) "." Cell Rep. 2022 Mar 15;38(11):110517. Pubmed PMID:
- Luo X, Schoch K, Jangam SV, Bhavana VH, Graves HK, Kansagra S, Jasien JM, Stong N, Keren B, Mignot C, Ravelli C; Undiagnosed Diseases Network, Bellen HJ, Wangler MF, Shashi V, Yamamoto S "." Hum Mol Genet. 2021 Jun 26;30(14):1283-1292. Pubmed PMID:
- Liu N, Schoch K, Luo X, Pena DML, Bhavana VH, Kukolich MK...Undiagnosed Diseases Network (UDN)...Shashi V#, Yamamoto S#. (# Corresponding Authors) "." Hum Mol Genet. 2018 Jul 15;27(14):2454-2465. Pubmed PMID:
- Salazar JL, Yang SA, Lin YQ, Li-Kroeger D, Marcogliese PC, Deal SL, Neely GG, Yamamoto S "." PLoS Genet. 2021 Dec 14;17(12):e1009962. Pubmed PMID:
- Jakobsdottir J*, van der Lee SJ*, Bis JC*, Chouraki V*, Li-Kroeger D*, Yamamoto S*, et al., (*Equal Contribution) "." PLoS Genet. 2016 Oct 20;12(10):e1006327. Pubmed PMID:
- Bellen HJ, Wangler MF, Yamamoto S "." Hum Mol Genet. 2019 Nov 21;28(R2):R207-R214. Pubmed PMID:
- Yamamoto S, Seto ES "." Exp Anim. 2014;63(2):107-119. Pubmed PMID:
- Harnish JM, Link N, Yamamoto S. "." Int J Mol Sci. 2021 Mar 8;22(5):2724. Pubmed PMID:
- Harnish JM, Li L, Rogic S, Poirier-Morency G, Kim SY; Undiagnosed Diseases Network, Boycott KM, Wangler MF, Bellen HJ, Hieter P, Pavlidis P, Liu Z, Yamamoto S "." Human Mut. 2022 Jun;43(6):743-759. Pubmed PMID:
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