Bo Peng, Ph.D.
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Bo Peng, Ph.D.
Associate Professor
Positions
- Associate Professor
-
Medicine - Epidemiology & Population Science
草榴社区入口
- Assistant Professor
-
Bioinformatics and Computational Biology
UT MD Anderson Cancer Center
Houston, Texas United States
Education
- MS from University of Houston
- 06/2001 - Houston, Texas United States
- PhD from Rice University
- 06/2006 - Houston, Texas United States
Professional Statement
Dr. Peng鈥檚 specialties include genetic simulations, epidemiological association analysis, and bioinformatic and next-generation sequencing data analysis. As an open-source advocate and an experienced software developer, he is the author of multiple large-scale software projects, including simuPOP, Variant Tools, and SoS Polyglot Notebook and Workflow System, and is battling COVID-19 with his new covid19-outbreak-simulator.Websites
Selected Publications
- Wang G, Peng B. "." PLoS Comput Biol.. 2019; Pubmed PMID:
- Peng B, Leong MC, Chen HS, Rotunno M, Brignole KR, Clarke J, Mechanic LE. "." Bioinformatics. 2019; Pubmed PMID:
- Peng B, Wang G, Ma J, Leong MC, Wakefield C, Melott J, Chiu Y, Du D, Weinstein JN "." Bioinformatics. 2018; Pubmed PMID:
- Peng B, Chen HS, Mechanic LE, Racine B, Clarke J, Gillanders E, Feuer EJ "." Genet Epidemiol.. 2015; Pubmed PMID:
- Chen HS, Hutter CM, Mechanic LE, Amos CI, Bafna V, Hauser ER, Hernandez RD, Li C, Liberles DA, McAllister K, Moore JH, Paltoo DN, Papanicolaou GJ, Peng B, Ritchie MD, Rosenfeld G, Witte JS, Gillanders EM, Feuer EJ. "." Genet Epidemiol.. 2015; Pubmed PMID:
- Wang GT, Peng B, Leal SM "." Am J Hum Genet.. 2014; Pubmed PMID:
- Peng B, Chen HS, Mechanic LE, Racine B, Clarke J, Clarke L, Gillanders E, Feuer EJ. "." Bioinformatics. 2013; Pubmed PMID:
Projects
- Script of Script
- (08/2016 - present)
- Polyglot Notebook and Workflow System that provide an environment for both interactive data analysis and batch data processing.
- Variant Tools
- (05/2010 - present)
- Software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
- Genetic Simulation Resources
- NCI (06/2012 - present)
- Genetic Simulation Resources (GSR) is a website provided by the National Cancer Institute (NCI) that aims to help researchers compare and choose the appropriate simulation tools for their studies.
Funding
- Computational tools for sequence-based large-scale epidemiology studies - #R01HG008972 (06/14/2016 - 03/31/2021) Grant funding from NIGRI
- Genetic simulation software registration & discovery system National Cancer Institute
Skills
- Bioinformatics
- Genetic Epidemiology
- Genetic Simulations
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